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AgeCommit message (Expand)Author
2014-08-22Merge branch 'master' of github.com:mutantturkey/SelectiveWholeGenomeAmplific...Calvin Morrison
2014-08-22revamp filter_average_binding.pyCalvin Morrison
2014-08-15fix syntax errorCalvin Morrison
2014-08-13add filter max bg mersCalvin Morrison
2014-08-05bg ratioCalvin Morrison
2014-07-16add working remove mers from fileCalvin Morrison
2014-07-16add ifleCalvin Morrison
2014-07-16work on filtersCalvin Morrison
2014-07-03fix that bug yoCalvin Morrison
2014-06-25make that a floatCalvin Morrison
2014-06-25really reduce memory usage of select_mers.pyCalvin Morrison
2014-05-20score regardlessCalvin Morrison
2014-05-20fix div by zeroCalvin Morrison
2014-04-23simplify select_mers.pyCalvin Morrison
2014-04-20force bash on lockCalvin Morrison
2014-04-18force 2.7Calvin Morrison
2014-04-14keep asking for files if they don't exist, filter melting temperature with up...Calvin Morrison
2014-04-14added new stuff for filter melting temperatureCalvin Morrison
2014-04-14don't use strstream, use kmer_locationsCalvin Morrison
2014-04-14mkdir on lock claimCalvin Morrison
2014-04-08more docs and add strandCalvin Morrison
2014-04-08add lockCalvin Morrison
2014-04-08update arg infoCalvin Morrison
2014-04-07tabular outputCalvin Morrison
2014-04-07working output full genome.pyCalvin Morrison
2014-04-07fix stream counting so it doesn't count overCalvin Morrison
2014-04-07initial commit of output_full_genome.pyCalvin Morrison
2014-04-07add genome lengthCalvin Morrison
2014-04-07+x average_bindingCalvin Morrison
2014-04-07fix reverse counts and output genome lengthCalvin Morrison
2014-04-02add exit codesCalvin Morrison
2014-04-01remove a debug lineCalvin Morrison
2014-04-01add feature to read from previously scored all-scores file, clean up code as ...Calvin Morrison
2014-04-01check exit status and more error checking in check_feasilbeCalvin Morrison
2014-03-31fix bug in using combination file. this closes #18Calvin Morrison
2014-03-31add UI for scorign func, update doc and varaiblesCalvin Morrison
2014-03-31add scorign to header and paramters and suchCalvin Morrison
2014-03-31add custom scoringCalvin Morrison
2014-03-31proper sizes with custom mersCalvin Morrison
2014-03-31This closes bug #19. adds variables into the scoring header for later referenceCalvin Morrison
2014-03-31Add feature to have a top-scores file. closes issue #21Calvin Morrison
2014-03-27Scoring all mer combinations from a file with a -mCalvin Morrison
2014-03-27improve output, add number of primers in first colum. this closes #12Calvin Morrison
2014-03-27move stuff aroundCalvin Morrison
2014-03-27Add scoring for specific combinations.Calvin Morrison
2014-03-26majorly rewrite and revamp the script to support runnign parts at a timeCalvin Morrison
2014-03-26add primer_weight to our score functionCalvin Morrison
2014-03-26use floatCalvin Morrison
2014-03-25Score mer statistics. This closes #6Calvin Morrison
2014-03-25update selectivity equation, and update readmeCalvin Morrison
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