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| author | Calvin Morrison <mutantturkey@gmail.com> | 2014-03-27 15:18:38 -0400 |
|---|---|---|
| committer | Calvin Morrison <mutantturkey@gmail.com> | 2014-03-27 15:18:38 -0400 |
| commit | 6138139143c881fa4b6536d6b231db4cb0ff0217 (patch) | |
| tree | a64ad1b38d07e50c32b177c6440a9d0b12014598 /src | |
| parent | 550b0e91a1c39dfec223f1959ec08d785927b2fc (diff) | |
improve output, add number of primers in first colum. this closes #12
Diffstat (limited to 'src')
| -rwxr-xr-x | src/score_mers.py | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/src/score_mers.py b/src/score_mers.py index 438a8e9..a7c27c9 100755 --- a/src/score_mers.py +++ b/src/score_mers.py @@ -190,11 +190,12 @@ def percentage(part, whole, precision=2): return str(percent) + "%" def write_header(fh): - fh.write("Combination\tScore\tFG_mean_dist\tFG_stdev_dist\tBG_ratio\n") + fh.write("nb_primers\tCombination\tScore\tFG_mean_dist\tFG_stdev_dist\tBG_ratio\n") def write_result(fh, score_res): combination, score_val, fg_mean_dist, fg_stddev_dist, bg_ratio = score_res - fh.write(str(combination) + "\t") + fh.write(str(len(combination)) + "\t") + fh.write(' '.join(combination) + "\t") fh.write(str(score_val) + "\t") fh.write(str(fg_mean_dist) + "\t") fh.write(str(fg_stddev_dist) + "\t") |