| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2014-04-07 | tabular output | Calvin Morrison | |
| 2014-04-07 | working output full genome.py | Calvin Morrison | |
| 2014-04-07 | fix stream counting so it doesn't count over | Calvin Morrison | |
| 2014-04-07 | initial commit of output_full_genome.py | Calvin Morrison | |
| 2014-04-07 | final renaming | Calvin Morrison | |
| 2014-04-07 | Rename! | Calvin Morrison | |
| 2014-04-07 | add genome length | Calvin Morrison | |
| 2014-04-07 | +x average_binding | Calvin Morrison | |
| 2014-04-07 | fix reverse counts and output genome length | Calvin Morrison | |
| 2014-04-07 | wait on exit | Calvin Morrison | |
| 2014-04-03 | fix min in README | Calvin Morrison | |
| 2014-04-03 | add scoring to paramters | Calvin Morrison | |
| 2014-04-02 | use min | Calvin Morrison | |
| 2014-04-02 | add exit codes | Calvin Morrison | |
| 2014-04-02 | add sort_by support for top-scores | Calvin Morrison | |
| 2014-04-02 | move some table stuff, add sortby param | Calvin Morrison | |
| 2014-04-02 | add description blurb, this closes #16 | Calvin Morrison | |
| 2014-04-01 | remove a debug line | Calvin Morrison | |
| 2014-04-01 | add section for rescoring | Calvin Morrison | |
| 2014-04-01 | add feature to read from previously scored all-scores file, clean up code as ↵ | Calvin Morrison | |
| well | |||
| 2014-04-01 | check exit status and more error checking in check_feasilbe | Calvin Morrison | |
| 2014-03-31 | update folder name | Calvin Morrison | |
| 2014-03-31 | add filter documenation to readme | Calvin Morrison | |
| 2014-03-31 | fix bug in using combination file. this closes #18 | Calvin Morrison | |
| 2014-03-31 | clean up readme | Calvin Morrison | |
| 2014-03-31 | update output tree | Calvin Morrison | |
| 2014-03-31 | fix header | Calvin Morrison | |
| 2014-03-31 | add UI for scorign func, update doc and varaibles | Calvin Morrison | |
| 2014-03-31 | add scorign to header and paramters and such | Calvin Morrison | |
| 2014-03-31 | update README.md for custom scoring | Calvin Morrison | |
| 2014-03-31 | add custom scoring | Calvin Morrison | |
| 2014-03-31 | proper sizes with custom mers | Calvin Morrison | |
| 2014-03-31 | This closes bug #19. adds variables into the scoring header for later reference | Calvin Morrison | |
| 2014-03-31 | fix | Calvin Morrison | |
| 2014-03-31 | fix sort | Calvin Morrison | |
| 2014-03-31 | Add feature to have a top-scores file. closes issue #21 | Calvin Morrison | |
| 2014-03-28 | Update README.md | Calvin Morrison | |
| 2014-03-28 | Update README.md | Calvin Morrison | |
| 2014-03-28 | fix links and headers | Calvin Morrison | |
| 2014-03-28 | Add headers, move stuff, toc | Calvin Morrison | |
| 2014-03-28 | Spelling fixes in documentation | Calvin Morrison | |
| whoop wehhoop | |||
| 2014-03-28 | update selected_mers.py portion | Calvin Morrison | |
| 2014-03-28 | add a newline | Calvin Morrison | |
| 2014-03-28 | add docs | Calvin Morrison | |
| 2014-03-27 | more documentation | Calvin Morrison | |
| 2014-03-27 | add docs for commit all combinations | Calvin Morrison | |
| 2014-03-27 | Scoring all mer combinations from a file with a -m | Calvin Morrison | |
| 2014-03-27 | add doc for ignore all from file | Calvin Morrison | |
| 2014-03-27 | Add support for ignoring all mers. and more | Calvin Morrison | |
| - add a check for filters. quit if no mers make it - add a final fg mer selection file in the $current_run folder - add a filter/ folder as not to clutter the current run - fix double quote syntax - add option for ignore all for the UI | |||
| 2014-03-27 | add ability to ignore all mers from a file | Calvin Morrison | |
 |
index : SelectiveWholeGenomeAmplification.git | |
| Parameterized sweeps of FASTA files to help locate useful primers. Work done for Penn bio research guys |
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