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AgeCommit message (Expand)Author
2014-03-28fix links and headersCalvin Morrison
2014-03-28Add headers, move stuff, tocCalvin Morrison
2014-03-28Spelling fixes in documentationCalvin Morrison
2014-03-28update selected_mers.py portionCalvin Morrison
2014-03-28add a newlineCalvin Morrison
2014-03-28add docsCalvin Morrison
2014-03-27more documentationCalvin Morrison
2014-03-27add docs for commit all combinationsCalvin Morrison
2014-03-27Scoring all mer combinations from a file with a -mCalvin Morrison
2014-03-27add doc for ignore all from fileCalvin Morrison
2014-03-27Add support for ignoring all mers. and moreCalvin Morrison
2014-03-27add ability to ignore all mers from a fileCalvin Morrison
2014-03-27improve output, add number of primers in first colum. this closes #12Calvin Morrison
2014-03-27move stuff aroundCalvin Morrison
2014-03-27Add scoring for specific combinations.Calvin Morrison
2014-03-26majorly rewrite and revamp the script to support runnign parts at a timeCalvin Morrison
2014-03-26add primer_weight to our score functionCalvin Morrison
2014-03-26use floatCalvin Morrison
2014-03-25Score mer statistics. This closes #6Calvin Morrison
2014-03-25fix tableCalvin Morrison
2014-03-25add fg_weight to SelectiveGenomeAmplificationUICalvin Morrison
2014-03-25update selectivity equation, and update readmeCalvin Morrison
2014-03-25revert makefileCalvin Morrison
2014-03-25add average binding filterCalvin Morrison
2014-03-25don't populate, use the bg conts from selectivityCalvin Morrison
2014-03-25update headerCalvin Morrison
2014-03-25fix lenCalvin Morrison
2014-03-25working upscore_wrapper.shCalvin Morrison
2014-03-25formatting changes, pylint up in this b****Calvin Morrison
2014-03-25remove stray ;Calvin Morrison
2014-03-25add score wrapper and SelectiveGenomeUI to make installCalvin Morrison
2014-03-25start to add debug variable to score_mersCalvin Morrison
2014-03-25Update scoring function.Calvin Morrison
2014-03-24add non-functioning score wrapperCalvin Morrison
2014-03-24Major Updates:Calvin Morrison
2014-03-24use biopython's temperature calculator... slow as dirtCalvin Morrison
2014-03-24fix strstream to work with mers listCalvin Morrison
2014-03-24add below and fix tabsCalvin Morrison
2014-03-23add mer list reading to strstreamCalvin Morrison
2014-03-21add end of sequences in as points in our arrayCalvin Morrison
2014-03-21fix warningCalvin Morrison
2014-03-21add sequence length commandCalvin Morrison
2014-03-19add output also to scores fileCalvin Morrison
2014-03-18update scoring equationCalvin Morrison
2014-03-17fix issue with readmeCalvin Morrison
2014-03-13whistpace and 1Calvin Morrison
2014-03-13Refactoring, features, rage!Calvin Morrison
2014-03-13add coutning points for reversesCalvin Morrison
2014-03-13add comments, add workflow explaination, move pop_{fg,bg} fnsCalvin Morrison
2014-03-13refactor binding layout, add commentsCalvin Morrison
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