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| author | Calvin Morrison <mutantturkey@gmail.com> | 2014-03-25 18:01:52 -0400 |
|---|---|---|
| committer | Calvin Morrison <mutantturkey@gmail.com> | 2014-03-25 18:01:52 -0400 |
| commit | 416d06d0b1745a52ba30599fde17f04db9e4572d (patch) | |
| tree | 0107e1b53896bfb7bd3f989337cfaf925dee4854 | |
| parent | 045c8168326144865fc8e301e40f58ff8d4b7e68 (diff) | |
fix table
| -rw-r--r-- | README.md | 2 |
1 files changed, 1 insertions, 1 deletions
@@ -38,7 +38,7 @@ max\_mer\_range | 12 | maximum mer size to use max\_mer\_distance | 5000 | maximum distance between mers in foreground output\_directory | $PWD/$foreground\_$background/ | ex. if fg is Bacillus.fasta and bg is HumanGenome.fasta then folder would be $PWD/Bacillus.fasta\_HumanGenome\_output.fasta/ counts\_directory | $output\_directory/.tmp | directory for counts directory -tmp\_directory=$output\_directory/.tmp | temporary files directory +tmp\_directory | $output\_directory/.tmp | temporary files directory max\_melting\_temp | 30° | maximum melting temp of mers min\_melting\_temp | 0° | minimum melting temp of mers min\_foreground\_binding\_average | 50000 | elminate mers that appear less frequently than the average (length of foreground / # of occurances) |