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| -rw-r--r-- | README.md | 2 |
1 files changed, 1 insertions, 1 deletions
@@ -38,7 +38,7 @@ max\_mer\_range | 12 | maximum mer size to use max\_mer\_distance | 5000 | maximum distance between mers in foreground output\_directory | $PWD/$foreground\_$background/ | ex. if fg is Bacillus.fasta and bg is HumanGenome.fasta then folder would be $PWD/Bacillus.fasta\_HumanGenome\_output.fasta/ counts\_directory | $output\_directory/.tmp | directory for counts directory -tmp\_directory=$output\_directory/.tmp | temporary files directory +tmp\_directory | $output\_directory/.tmp | temporary files directory max\_melting\_temp | 30° | maximum melting temp of mers min\_melting\_temp | 0° | minimum melting temp of mers min\_foreground\_binding\_average | 50000 | elminate mers that appear less frequently than the average (length of foreground / # of occurances) |