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2014-04-03add scoring to paramtersCalvin Morrison
2014-04-02use minCalvin Morrison
2014-04-02add exit codesCalvin Morrison
2014-04-02add sort_by support for top-scoresCalvin Morrison
2014-04-02move some table stuff, add sortby paramCalvin Morrison
2014-04-02add description blurb, this closes #16Calvin Morrison
2014-04-01remove a debug lineCalvin Morrison
2014-04-01add section for rescoringCalvin Morrison
2014-04-01add feature to read from previously scored all-scores file, clean up code as ↵Calvin Morrison
well
2014-04-01check exit status and more error checking in check_feasilbeCalvin Morrison
2014-03-31update folder nameCalvin Morrison
2014-03-31add filter documenation to readmeCalvin Morrison
2014-03-31fix bug in using combination file. this closes #18Calvin Morrison
2014-03-31clean up readmeCalvin Morrison
2014-03-31update output treeCalvin Morrison
2014-03-31fix headerCalvin Morrison
2014-03-31add UI for scorign func, update doc and varaiblesCalvin Morrison
2014-03-31add scorign to header and paramters and suchCalvin Morrison
2014-03-31update README.md for custom scoringCalvin Morrison
2014-03-31add custom scoringCalvin Morrison
2014-03-31proper sizes with custom mersCalvin Morrison
2014-03-31This closes bug #19. adds variables into the scoring header for later referenceCalvin Morrison
2014-03-31fixCalvin Morrison
2014-03-31fix sortCalvin Morrison
2014-03-31Add feature to have a top-scores file. closes issue #21Calvin Morrison
2014-03-28Update README.mdCalvin Morrison
2014-03-28Update README.mdCalvin Morrison
2014-03-28fix links and headersCalvin Morrison
2014-03-28Add headers, move stuff, tocCalvin Morrison
2014-03-28Spelling fixes in documentationCalvin Morrison
whoop wehhoop
2014-03-28update selected_mers.py portionCalvin Morrison
2014-03-28add a newlineCalvin Morrison
2014-03-28add docsCalvin Morrison
2014-03-27more documentationCalvin Morrison
2014-03-27add docs for commit all combinationsCalvin Morrison
2014-03-27Scoring all mer combinations from a file with a -mCalvin Morrison
2014-03-27add doc for ignore all from fileCalvin Morrison
2014-03-27Add support for ignoring all mers. and moreCalvin Morrison
- add a check for filters. quit if no mers make it - add a final fg mer selection file in the $current_run folder - add a filter/ folder as not to clutter the current run - fix double quote syntax - add option for ignore all for the UI
2014-03-27add ability to ignore all mers from a fileCalvin Morrison
2014-03-27improve output, add number of primers in first colum. this closes #12Calvin Morrison
2014-03-27move stuff aroundCalvin Morrison
2014-03-27Add scoring for specific combinations.Calvin Morrison
- add scoring for specific combos - update readme - add CLI args for score_mers.py - update score_wrapper - use more generic print functions in score_mers
2014-03-26majorly rewrite and revamp the script to support runnign parts at a timeCalvin Morrison
2014-03-26add primer_weight to our score functionCalvin Morrison
2014-03-26use floatCalvin Morrison
2014-03-25Score mer statistics. This closes #6Calvin Morrison
2014-03-25fix tableCalvin Morrison
2014-03-25add fg_weight to SelectiveGenomeAmplificationUICalvin Morrison
2014-03-25update selectivity equation, and update readmeCalvin Morrison
2014-03-25revert makefileCalvin Morrison
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