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Quikr - a bio classifier based on NNLS
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quikr.py
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2013-03-08
convert into a module, rename out functions so all quikr functions are within...
mutantturkey
2013-03-07
starting to modularize
Calvin
2013-03-07
multifasta_to_otu.py support for compression
Calvin
2013-03-07
added gzip compression support
Calvin
2013-03-06
removed debugging statements
Calvin
2013-03-06
do the matrix rotations and manipulations in quikr_train instead of quikr
Calvin
2013-02-28
use the load from file instead of calling it directly, should work now.
Calvin
2013-02-27
Update multifasta_to_otu.py for new quikr function
Calvin
2013-02-27
* add helper quikr_load_trained_from_file to load file
Calvin
2013-02-22
quikr now works! the numbers are almost identical to matlab (is 6th digit pre...
mutantturkey
2013-02-22
require more arguments since people will always be required to have certain o...
mutantturkey
2013-02-22
Fixed quikr to actually work, insert headers of 1's and 0's into our arrays, ...
Calvin
2013-02-19
added argument to accept output (solution vector) into a csv
mutantturkey
2013-02-19
saving changes to work remotely
Calvin
2013-02-18
set the input matrix properly
Calvin
2013-02-15
tried to run it, fixed ftr several times
Calvin
2013-02-15
added some comments
mutantturkey
2013-02-14
added arg parsing, and fixed a few errors, still have not tried to run code
Calvin
2013-02-14
quikr and quikr_train
Calvin