dna-utils.git - Tools for parsing FASTA files very fast

Age	Commit message (Collapse)	Author
2014-04-18	add OSX support, or any supprot for people without getline	Calvin Morrison

2014-04-09	MERGE sparse trunk into master	Calvin Morrison

2014-03-12	fix missing breakv0.0.4	Calvin Morrison

2014-03-12	update cli for reverse-compliment counting	Calvin Morrison

2014-03-06	update readme, add a check_null_ptr function to clear up clutter	Calvin Morrison

2014-02-27	use sparse always if we use --mer	Calvin Morrison

2014-02-27	fixed sparse in combination with --mer-file	Calvin Morrison

2014-02-24	add more verbose error messages and add more memory checks	Calvin Morrison

2014-02-01	remove str alloc and replace inside s for strstr	Calvin Morrison

2014-02-01	use pow_four instead	Calvin Morrison

2014-02-01	add getopts to kmer_counts_per_sequene and sparse output options	Calvin Morrison

2014-02-01	get rid of position, add help	Calvin Morrison

2014-01-31	fix argv/c checking	Calvin Morrison

2014-01-30	kmer_count_per_sequence: add option to load specific mers from file, add ↵	Calvin Morrison
	multiline ecounting
2014-01-07	fix kmer_counts_per_sequence, make sure we convert the array fully, and ↵	Calvin Morrison
	update kmer_utils for str[i] == 5 instead of >> 2
2013-11-07	rename to counts per sequence, don't provide frequencies only counts	Calvin Morrison

2013-11-07	rename to counts per sequence, don't provide frequencies only counts	Calvin Morrison