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authorCalvin Morrison <calvin@jupiter.cs.drexel.edu>2014-04-18 16:18:06 -0400
committerCalvin Morrison <calvin@jupiter.cs.drexel.edu>2014-04-18 16:18:06 -0400
commit4698388304aba000592f71a10d1240ade01fb504 (patch)
tree50bfc7b2ee41a49bad62315c610bda73838766e1 /kmer_counts_per_sequence.c
parent1a6dae7724e2e4cf82634924adaf0101600605f4 (diff)
add OSX support, or any supprot for people without getline
Diffstat (limited to 'kmer_counts_per_sequence.c')
-rw-r--r--kmer_counts_per_sequence.c4
1 files changed, 4 insertions, 0 deletions
diff --git a/kmer_counts_per_sequence.c b/kmer_counts_per_sequence.c
index e9ca812..95f57fa 100644
--- a/kmer_counts_per_sequence.c
+++ b/kmer_counts_per_sequence.c
@@ -8,6 +8,10 @@
#include "kmer_utils.h"
+#ifdef FORCE_GETLINE
+ #include "getline/getline.h"
+#endif
+
void help() {
printf("usage: kmer_counts_per_sequence input_file kmer [kmer-file] ...\n\n"
"count mers in each sequence of size k from a fasta file\n"