| Age | Commit message (Expand) | Author |
|---|
| 2014-03-25 | Update scoring function. | Calvin Morrison |
| 2014-03-24 | add non-functioning score wrapper | Calvin Morrison |
| 2014-03-24 | Major Updates: | Calvin Morrison |
| 2014-03-24 | use biopython's temperature calculator... slow as dirt | Calvin Morrison |
| 2014-03-24 | fix strstream to work with mers list | Calvin Morrison |
| 2014-03-24 | add below and fix tabs | Calvin Morrison |
| 2014-03-23 | add mer list reading to strstream | Calvin Morrison |
| 2014-03-21 | add end of sequences in as points in our array | Calvin Morrison |
| 2014-03-21 | fix warning | Calvin Morrison |
| 2014-03-21 | add sequence length command | Calvin Morrison |
| 2014-03-19 | add output also to scores file | Calvin Morrison |
| 2014-03-18 | update scoring equation | Calvin Morrison |
| 2014-03-17 | fix issue with readme | Calvin Morrison |
| 2014-03-13 | whistpace and 1 | Calvin Morrison |
| 2014-03-13 | Refactoring, features, rage! | Calvin Morrison |
| 2014-03-13 | add coutning points for reverses | Calvin Morrison |
| 2014-03-13 | add comments, add workflow explaination, move pop_{fg,bg} fns | Calvin Morrison |
| 2014-03-13 | refactor binding layout, add comments | Calvin Morrison |
| 2014-03-13 | add message and don't >> | Calvin Morrison |
| 2014-03-06 | use kmer_continuous_count instead of kmer_total_count, remove tmp file, updat... | Calvin Morrison |
| 2014-03-05 | fix background as foreground | Calvin Morrison |
| 2014-03-05 | should work: | Calvin Morrison |
| 2014-03-05 | more verbose score output | Calvin Morrison |
| 2014-03-05 | fix type | Calvin Morrison |
| 2014-03-03 | update defaults and align variable names with global env variables | Calvin Morrison |
| 2014-03-03 | update readnme | Calvin Morrison |
| 2014-03-03 | update readnme | Calvin Morrison |
| 2014-03-03 | add load_heterodimer_dic function | Calvin Morrison |
| 2014-03-03 | check heterodimer dic first because it's likely to be the #1 cause of issues | Calvin Morrison |
| 2014-03-03 | add check to see if results are even possible, and use gzip out | Calvin Morrison |
| 2014-03-03 | update arguemnts, make {fg,bg}_genome_length global | Calvin Morrison |
| 2014-03-03 | update parameters file | Calvin Morrison |
| 2014-02-17 | output filters into output directory not temp to enable multiple runs at once | Calvin Morrison |
| 2014-02-05 | use a ifilter outside | Calvin Morrison |
| 2014-02-04 | seperate out scoring stuff into our iterator as a filter | Calvin Morrison |
| 2014-02-04 | add check functions to filter without calling the jobs | Calvin Morrison |
| 2014-02-04 | max_consecutive speed up | Calvin Morrison |
| 2014-02-04 | update save locations | Calvin Morrison |
| 2014-01-30 | update score mers with hererodimers | Calvin Morrison |
| 2014-01-29 | fix warning | Calvin Morrison |
| 2014-01-29 | rm | Calvin Morrison |
| 2014-01-29 | fix warning | Calvin Morrison |
| 2014-01-29 | fix corner case | Calvin Morrison |
| 2014-01-29 | add filtering based on consecutive mer lengths | Calvin Morrison |
| 2014-01-28 | add max_consecutive_binding.py | Calvin Morrison |
| 2014-01-23 | update min mer, add fg and bg to parameters | Calvin Morrison |
| 2014-01-22 | output parameters | Calvin Morrison |
| 2014-01-22 | add different outputs for each run | Calvin Morrison |
| 2014-01-22 | rename in script | Calvin Morrison |
| 2014-01-22 | split | Calvin Morrison |
