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authorCalvin Morrison <mutantturkey@gmail.com>2014-03-03 14:58:55 -0500
committerCalvin Morrison <mutantturkey@gmail.com>2014-03-03 14:58:55 -0500
commit3206ee1ccdcfac65e6af7f0c9913854985b3ee58 (patch)
tree400e091cc7e738c14eb78884ce8d256d9442b09d
parent709a120afd29581cf846ef315f70dbda57879afb (diff)
update readnme
-rw-r--r--README.md4
1 files changed, 2 insertions, 2 deletions
diff --git a/README.md b/README.md
index fb3f769..915ad8b 100644
--- a/README.md
+++ b/README.md
@@ -42,8 +42,8 @@ Y | tmp\_directory=$output\_directory/.tmp | temporary files directory
Y | max\_melting\_temp | 30° | maximum melting temp of mers
Y | min\_melting\_temp | 0° | minimum melting temp of mers
Y | min\_mer\_count | Not Enabled (0) | only select mers that occur more frequently than this number
-Y | max\_select | |maximum number of mers to pick
-Y | max\_check | |maximum number of mers to select (check the top #)
+Y | max\_select | 15 | maximum number of mers to pick
+Y | max\_check | 35 | maximum number of mers to select (check the top #)
Y | ignore\_mers | Not Enabled | mers to explicitly ignore, space seperated ex. ignore\_mers="ACAGTA ACCATAA ATATATAT"
Y | foreground | Not Enabled | path of foreground file
Y | background | Not Enabled | path of background file