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1 files changed, 2 insertions, 2 deletions
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@@ -42,8 +42,8 @@ Y | tmp\_directory=$output\_directory/.tmp | temporary files directory
Y | max\_melting\_temp | 30° | maximum melting temp of mers
Y | min\_melting\_temp | 0° | minimum melting temp of mers
Y | min\_mer\_count | Not Enabled (0) | only select mers that occur more frequently than this number
-Y | max\_select | |maximum number of mers to pick
-Y | max\_check | |maximum number of mers to select (check the top #)
+Y | max\_select | 15 | maximum number of mers to pick
+Y | max\_check | 35 | maximum number of mers to select (check the top #)
Y | ignore\_mers | Not Enabled | mers to explicitly ignore, space seperated ex. ignore\_mers="ACAGTA ACCATAA ATATATAT"
Y | foreground | Not Enabled | path of foreground file
Y | background | Not Enabled | path of background file