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Diffstat (limited to 'README.md')
| -rw-r--r-- | README.md | 2 |
1 files changed, 1 insertions, 1 deletions
@@ -41,7 +41,7 @@ Y | counts\_directory | $output\_directory/.tmp | directory for counts directory Y | tmp\_directory=$output\_directory/.tmp | temporary files directory Y | max\_melting\_temp | 30° | maximum melting temp of mers Y | min\_melting\_temp | 0° | minimum melting temp of mers -Y | min\_mer\_count | Not Enabled (0) | only select mers that occur more frequently than this number +Y | min\_foreground\_binding\_average | 50000 | elminate mers that appear less frequently than the average (length of foreground / # of occurances) Y | max\_select | 15 | maximum number of mers to pick Y | max\_check | 35 | maximum number of mers to select (check the top #) Y | ignore\_mers | Not Enabled | mers to explicitly ignore, space seperated ex. ignore\_mers="ACAGTA ACCATAA ATATATAT" |