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| author | Calvin Morrison <mutantturkey@gmail.com> | 2014-08-05 15:30:59 -0400 |
|---|---|---|
| committer | Calvin Morrison <mutantturkey@gmail.com> | 2014-08-05 15:30:59 -0400 |
| commit | 972add88040cac2f0a969e99c533051be7220ccc (patch) | |
| tree | 61fdc7302b143f780166b0914bd84dffb4b0fe91 /SelectiveWholeGenomeAmplification | |
| parent | 765a73ed7bb055d11aea2627af8daa9cfc6d664b (diff) | |
bg ratio
Diffstat (limited to 'SelectiveWholeGenomeAmplification')
| -rwxr-xr-x | SelectiveWholeGenomeAmplification | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/SelectiveWholeGenomeAmplification b/SelectiveWholeGenomeAmplification index 23b14bc..7a3d46b 100755 --- a/SelectiveWholeGenomeAmplification +++ b/SelectiveWholeGenomeAmplification @@ -179,6 +179,9 @@ done # sort score by the minimum or maximum value. acceptable parameters are min or max. : ${sort_by="min"} +# bg_ratio +: ${min_bg_ratio=0} + export ignore_mers export min_mer_range export max_mer_range @@ -194,8 +197,6 @@ export min_melting_temp export fg_weight export primer_weight - -echo # check foreground and background if [[ ! -f "$foreground" ]]; then echo "Error: could not open foreground: $foreground" |