From 972add88040cac2f0a969e99c533051be7220ccc Mon Sep 17 00:00:00 2001
From: Calvin Morrison <mutantturkey@gmail.com>
Date: Tue, 5 Aug 2014 15:30:59 -0400
Subject: bg ratio

---
 SelectiveWholeGenomeAmplification | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

(limited to 'SelectiveWholeGenomeAmplification')

diff --git a/SelectiveWholeGenomeAmplification b/SelectiveWholeGenomeAmplification
index 23b14bc..7a3d46b 100755
--- a/SelectiveWholeGenomeAmplification
+++ b/SelectiveWholeGenomeAmplification
@@ -179,6 +179,9 @@ done
 # sort score by the minimum or maximum value. acceptable parameters are min or max.
 : ${sort_by="min"}
 
+# bg_ratio
+: ${min_bg_ratio=0}
+
 export ignore_mers
 export min_mer_range
 export max_mer_range
@@ -194,8 +197,6 @@ export min_melting_temp
 export fg_weight
 export primer_weight
 
-
-echo
 # check foreground and background
 if [[ ! -f "$foreground" ]]; then
 	echo "Error: could not open foreground: $foreground"
-- 
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