diff options
| author | Calvin Morrison <mutantturkey@gmail.com> | 2014-03-27 22:08:35 -0400 |
|---|---|---|
| committer | Calvin Morrison <mutantturkey@gmail.com> | 2014-03-27 22:08:35 -0400 |
| commit | a17c7fdf6e74652ab05eaa00203b40ad7a41e549 (patch) | |
| tree | 93a56422682709d074b4dcd1189884040f56c8ee /SelectiveGenomeAmplificationUI | |
| parent | f746bbb1b2c3e4177f574f9329d9e6242464ca4d (diff) | |
Add support for ignoring all mers. and more
- add a check for filters. quit if no mers make it
- add a final fg mer selection file in the $current_run folder
- add a filter/ folder as not to clutter the current run
- fix double quote syntax
- add option for ignore all for the UI
Diffstat (limited to 'SelectiveGenomeAmplificationUI')
| -rwxr-xr-x | SelectiveGenomeAmplificationUI | 4 |
1 files changed, 4 insertions, 0 deletions
diff --git a/SelectiveGenomeAmplificationUI b/SelectiveGenomeAmplificationUI index 810d0ca..edd56c8 100755 --- a/SelectiveGenomeAmplificationUI +++ b/SelectiveGenomeAmplificationUI @@ -43,6 +43,10 @@ questions = [ 'default_str': "None", 'variable': 'ignore_mers'}, + {'question': 'Enter files to ignore all mers from? (space seperated)', + 'default_str': "None", + 'variable': 'ignore_all_mers_from_files'}, + { 'question': 'maximum distance between mers in the final selection?', 'default_str': "5000 bases", 'variable': 'max_mer_distance' }, |