update selectivity equation, and update readme

1 files changed, 5 insertions, 0 deletions

diff --git a/SelectiveGenomeAmplification b/SelectiveGenomeAmplification
index b66d06c..b875fe0 100755
--- a/SelectiveGenomeAmplification
+++ b/SelectiveGenomeAmplification
@@ -56,6 +56,9 @@ fi
 # maximum number of mers that are consecutively binding
 : ${max_consecutive_binding=4}
 
+# fg_weight, now much to weight to give the higher bindnig primers
+: ${fg_weight=0}
+
 export ignore_mers
 export min_mer_range
 export max_mer_range
@@ -68,6 +71,8 @@ export max_mer_distance
 export max_melting_temp 
 export min_melting_temp 
 
+export fg_weight
+
 
 # Make our output directory
 if [ ! -d $output_directory ]; then