From a62572ad5ccbc1e968a5164daaaf690e2881062d Mon Sep 17 00:00:00 2001 From: Calvin Morrison Date: Tue, 25 Mar 2014 17:48:31 -0400 Subject: update selectivity equation, and update readme --- SelectiveGenomeAmplification | 5 +++++ 1 file changed, 5 insertions(+) (limited to 'SelectiveGenomeAmplification') diff --git a/SelectiveGenomeAmplification b/SelectiveGenomeAmplification index b66d06c..b875fe0 100755 --- a/SelectiveGenomeAmplification +++ b/SelectiveGenomeAmplification @@ -56,6 +56,9 @@ fi # maximum number of mers that are consecutively binding : ${max_consecutive_binding=4} +# fg_weight, now much to weight to give the higher bindnig primers +: ${fg_weight=0} + export ignore_mers export min_mer_range export max_mer_range @@ -68,6 +71,8 @@ export max_mer_distance export max_melting_temp export min_melting_temp +export fg_weight + # Make our output directory if [ ! -d $output_directory ]; then -- cgit v1.2.3