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| author | Calvin Morrison <mutantturkey@gmail.com> | 2014-03-31 13:38:14 -0400 |
|---|---|---|
| committer | Calvin Morrison <mutantturkey@gmail.com> | 2014-03-31 13:38:14 -0400 |
| commit | 7d87aed3cce0b0b498b3fb23e65037c3b5c24e8d (patch) | |
| tree | 7e3995667e3a9de08b16f33d6367d99d979c1f81 /SelectiveGenomeAmplification | |
| parent | 5a5d89d3881cb0d9014168845d96e5eebeb2bd42 (diff) | |
fix sort
Diffstat (limited to 'SelectiveGenomeAmplification')
| -rwxr-xr-x | SelectiveGenomeAmplification | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/SelectiveGenomeAmplification b/SelectiveGenomeAmplification index 9793293..4b3c8dc 100755 --- a/SelectiveGenomeAmplification +++ b/SelectiveGenomeAmplification @@ -324,7 +324,7 @@ if [[ -n "$step_score" ]] || [[ -n "$all" ]]; then echo "sorting and outputting top $output_top_nb scores" echo "top scores output file: $output_directory/$current_run/top-scores" head -n 1 $output_directory/$current_run/all-scores > $output_directory/$current_run/top-scores - tail -n +2 $output_directory/$current_run/all-scores | sort -r $output_directory/$current_run/all-scores -t $'\t' -nk 3 | head -n $output_top_nb >> $output_directory/$current_run/top-scores + tail -n +2 $output_directory/$current_run/all-scores | sort -r -t $'\t' -nk 3 | head -n $output_top_nb >> $output_directory/$current_run/top-scores fi |