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// Copyright 2013 Calvin Morrison
#include <stdio.h>
#include <stdlib.h>
#include <unistd.h>
#include <stdint.h>
int main(int argc, char **argv) {
long unsigned long a = 0;
long unsigned long c = 0;
long unsigned long g = 0;
long unsigned long t = 0;
if(argc != 2) {
printf("Please supply a filename, and only a filename\n");
exit(EXIT_FAILURE);
}
FILE *fh = fopen(argv[1], "r" );
if(fh == NULL) {
fprintf(stderr, "Couldn't open: %s\n", argv[1]);
exit(EXIT_FAILURE);
}
char line[8192];
while (fgets(line, 8192, fh) != NULL) {
int i = 0;
for(i = 0; i < strlen(line); i++) {
switch(line[i]) {
case 'A':
case 'a':
a++;
break;
case 'C':
case 'c':
c++;
break;
case 'G':
case 'g':
g++;
break;
case 'T':
case 't':
t++;
break;
}
}
}
printf("A:%llu\nC:%llu\nG:%llu\nT:%llu\n", a, c, g, t);
return EXIT_SUCCESS;
}
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