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// our malloc checker
void check_malloc(void *ptr, char *error);
// count the sequences in a fasta file
unsigned long long count_sequences(const char *filename);
// normalize a matrix by dividing each element by the sum of it's column
void normalize_matrix(double *matrix, int height, int width);
// load a sensing matrix
struct matrix *load_sensing_matrix(const char *filename, unsigned int target_kmer);
// get_rare_value
void get_rare_value(double *count_matrix, unsigned long long width, double rare_percent, unsigned long long *ret_rare_value, unsigned long long *ret_rare_width);
// getline reimpl
ssize_t getseq(char **lineptr, size_t *n, FILE *fp);
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