| Age | Commit message (Expand) | Author |
|---|
| 2013-08-29 | parse -h and --help and print out the help message | Calvin Morrison |
| 2013-08-16 | Merge branch 'master' of github.com:mutantturkey/quikr | Calvin Morrison |
| 2013-08-16 | remove unused case | Calvin Morrison |
| 2013-06-13 | use readdir and #omp criticalv1.0.3 | Calvin |
| 2013-06-12 | update multifasta paths | Calvin |
| 2013-06-12 | fix case | Calvin |
| 2013-06-12 | fix missing comma | Calvin |
| 2013-06-12 | add --version and -V | Calvin |
| 2013-06-12 | use larger size for count_commmand, remove extra quotes, and fix a broken che... | Calvin Morrison |
| 2013-06-12 | Matlab: move multifasta2otu into the main quikr folder | Calvin Morrison |
| 2013-06-11 | Merge branch 'master' of github.com:mutantturkey/quikr | Calvin |
| 2013-06-11 | finally push this patch to fix the lack of an end | Calvin |
| 2013-06-11 | remove file | Calvin Morrison |
| 2013-06-11 | remove extra word | Calvin |
| 2013-06-11 | updated functions with long | Calvin |
| 2013-06-11 | Merge branch 'master' of github.com:EESI/quikr | Calvin |
| 2013-06-11 | use int64_t for NNLS to avoid overflow issues | Calvin |
| 2013-06-11 | small edits to man page | Calvin |
| 2013-06-11 | use longs instead of ints, fix a mistake in the --help | Calvin |
| 2013-06-10 | finish gzip decoding, YOU MUST retrain your api | Calvin |
| 2013-06-10 | native zlib decoding for quikr/multifasta, was done earlier but never commite... | Calvin |
| 2013-06-10 | remove unused variable | Calvin |
| 2013-06-07 | quikrCustomTranied was not using the specified kmer. Use the correct kmer and... | Calvin Morrison |
| 2013-06-07 | free getline's calls | Calvin Morrison |
| 2013-06-07 | updated help text and manpages | Calvin |
| 2013-06-06 | fixed a malloc error, and fixed some strings | Calvin |
| 2013-05-28 | modified quikrTrain.m to not depend on a mer file, instead use the generate_k... | Calvin |
| 2013-05-28 | removed files | Calvin |
| 2013-05-28 | removed unused nbc code | Calvin |
| 2013-05-20 | use n*n*n instead on n*n for nnls | Calvin |
| 2013-05-20 | updated documentation strings, add man page to be installed globally | Calvin |
| 2013-05-19 | native gzip decoding | Calvin Morrison |
| 2013-05-16 | used newlines in readme for clarity, update our references to the ../../../data/ | Calvin |
| 2013-05-15 | python: add some more descriptive comments, use lamb instead of default lamb | Calvin |
| 2013-05-15 | removed the bsd license | Calvin |
| 2013-05-15 | added file checking for multifasta_to_otu | Calvin |
| 2013-05-15 | add some error checking | Calvin |
| 2013-05-15 | cleanup kmer/lambda default values | Calvin |
| 2013-05-15 | add -d flag for debugging so verbose doesn't take longer, use generate_kmers ... | Calvin |
| 2013-05-14 | release1.0 | Calvin |
| 2013-05-14 | add some documentation | Calvin |
| 2013-05-14 | delete spurious print | Calvin |
| 2013-05-14 | fixed kmer argument bug | Calvin |
| 2013-05-14 | use sensing matrix | Calvin |
| 2013-05-14 | remove generate kmers from quikr | Calvin |
| 2013-05-14 | have matlab use global executables | Calvin |
| 2013-05-14 | generate kmers should stand alone | Calvin |
| 2013-05-14 | remove probabilties by read | Calvin |
| 2013-05-10 | don't use an output directory, and use basename's for the OTU_table | Calvin |
| 2013-05-03 | multifasta now reads .fa and fasta file sonly | Calvin |
