| Age | Commit message (Expand) | Author |
|---|
| 2013-03-14 | formatting fixes and renamed isCompressed to is_compressed | Calvin |
| 2013-03-14 | fix automatically creating output directory | Calvin |
| 2013-03-14 | fix multifasta_to_otu to use proper function names... need to get some automa... | Calvin |
| 2013-03-14 | fixed an incorrect namespace | Calvin |
| 2013-03-14 | get rid of OS checks for count, assume it is called count-kmers | Calvin |
| 2013-03-14 | re-add the kmer filename checK | Calvin |
| 2013-03-13 | fix bad old commit | Calvin |
| 2013-03-13 | added multi_fasta_otu to cli.markdown | Calvin |
| 2013-03-13 | added matlab markdown and edited cli | Calvin |
| 2013-03-13 | added setup.py for python quikr module | Calvin |
| 2013-03-13 | updated makefile to install nbc properly and python properly. | Calvin |
| 2013-03-12 | initial commit of some documentation | Calvin |
| 2013-03-12 | removed multifasta's py extension, modified the --help argument output for q... | Calvin |
| 2013-03-11 | removed documented matlab, add bare makefile | Calvin |
| 2013-03-11 | move python stuff to python directory | Calvin |
| 2013-03-11 | adding matlab code | Calvin |
| 2013-03-08 | moving some stuff | Calvin |
| 2013-03-08 | fix quikr_train to work with updated quikr module | mutantturkey |
| 2013-03-08 | convert into a module, rename out functions so all quikr functions are within... | mutantturkey |
| 2013-03-08 | fix quikr | mutantturkey |
| 2013-03-08 | fix multifasta_to_otu | mutantturkey |
| 2013-03-07 | starting to modularize | Calvin |
| 2013-03-07 | minor formatting cleanup | Calvin |
| 2013-03-07 | multifasta_to_otu.py support for compression | Calvin |
| 2013-03-07 | added gzip compression support | Calvin |
| 2013-03-07 | Check if file is compressed | Calvin |
| 2013-03-06 | removed debugging statements | Calvin |
| 2013-03-06 | do the matrix rotations and manipulations in quikr_train instead of quikr | Calvin |
| 2013-03-06 | Cleanups and refactoring | Calvin |
| 2013-03-06 | fixed index | Calvin |
| 2013-03-06 | formatting cleanups, removed unused import, deleted unused lines | Calvin |
| 2013-03-05 | Added OTU table output and grep parsing | Calvin |
| 2013-03-05 | simplify generate_kmers.py | Calvin |
| 2013-03-05 | Added generate_kmers.py | Calvin |
| 2013-02-28 | use the load from file instead of calling it directly, should work now. | Calvin |
| 2013-02-27 | working on the iterators | Calvin |
| 2013-02-27 | Create a dictionary of our trained matrix id's | Calvin |
| 2013-02-27 | Write the comments in for the work to be done | Calvin |
| 2013-02-27 | Update multifasta_to_otu.py for new quikr function | Calvin |
| 2013-02-27 | * add helper quikr_load_trained_from_file to load file | Calvin |
| 2013-02-26 | added multifasta.m and documenting it | Calvin |
| 2013-02-26 | changes | Calvin |
| 2013-02-26 | merge resolution | Calvin |
| 2013-02-26 | some upodates | Calvin |
| 2013-02-26 | iteratively loop through | mutantturkey |
| 2013-02-25 | fixed syntax mistake | Calvin |
| 2013-02-25 | initial commit, playing around with threading | mutantturkey |
| 2013-02-22 | fix example in header, fix weird character in args, remove incorrect dtype fr... | Calvin |
| 2013-02-22 | changed argument help messages | Calvin |
| 2013-02-22 | quikr now works! the numbers are almost identical to matlab (is 6th digit pre... | mutantturkey |
