diff options
Diffstat (limited to 'src/c/quikr.1')
| -rw-r--r-- | src/c/quikr.1 | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/src/c/quikr.1 b/src/c/quikr.1 index 4418a7f..7d0baf6 100644 --- a/src/c/quikr.1 +++ b/src/c/quikr.1 @@ -36,6 +36,9 @@ specify what size of kmer to use. (default value is 6) .B \-l, --lambda lambda value to use. (default value is 10000) .TP +.B \-r, --rare-percent +remove mers from classification if their values are less than the x percentile of values in the sample (default value is 10000) +.TP .B \-o, --output OTU_FRACTION_PRESENT a vector representing the percentage of database sequence's presence in sample. (csv output) .TP @@ -52,7 +55,7 @@ quikr -i sample.fa -s rdp_sensing_matrix.gz -o frequencies.txt \fBmultifasta_to_otu\fP(1), \fBquikr_train\fP(1). .SH AUTHORS .B quikr -was written by Gail Rosen <gailr@ece.drexel.edu>, Calvin Morrison +was written by Gail Rosen <gailr@ece.drexel.edu>, Calvin Morrison <mutantturkey@gmail.com>, David Koslicki, Simon Foucart, and Jean-Luc Bouchot. .SH REPORTING BUGS .TP |