diff options
| author | Calvin <calvin@EESI> | 2013-05-03 17:15:48 -0400 |
|---|---|---|
| committer | Calvin <calvin@EESI> | 2013-05-03 17:15:48 -0400 |
| commit | 734d4a56a854bf152fee42f05ed02c5ffbaf4035 (patch) | |
| tree | 96399efc5097d0a0725eedce92ed833cbaa58847 /src/python | |
| parent | 7e39f94ccb2770789a411114c09fe74431883bff (diff) | |
modified command line arguments
Diffstat (limited to 'src/python')
| -rwxr-xr-x | src/python/quikr_train | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/src/python/quikr_train b/src/python/quikr_train index 12e492f..3096d14 100755 --- a/src/python/quikr_train +++ b/src/python/quikr_train @@ -21,8 +21,8 @@ def main(): the quikr function. \n You must supply a kmer. \n ") parser.add_argument("-i", "--input", help="training database of sequences (fasta format)", required=True) - parser.add_argument("-o", "--output", help="sensing matrix (text file)", required=True) - parser.add_argument("-k", "--kmer", help="kmer size (integer)", + parser.add_argument("-o", "--output", help="trained matrix (text file)", required=True) + parser.add_argument("-k", "--kmer", help="kmer size, default size is 6)", type=int, required=False ) parser.add_argument("-z", "--compress", help="compress output (flag)", action='store_true', required=False) |