diff options
author | Calvin Morrison <mutantturkey@gmail.com> | 2013-10-28 12:04:46 -0400 |
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committer | Calvin Morrison <mutantturkey@gmail.com> | 2013-10-28 12:04:46 -0400 |
commit | fa48bb8c603ad6f2a98b425b6a97e1dc27ecc166 (patch) | |
tree | 5800cd532a83ebfc91ba3ca1d4b3a79e7a5ab951 /src/c/quikr_functions.h | |
parent | c1a34163771229aa269ada443c6baa38f3073c11 (diff) |
Update quikr_functions to read our sensing format
Diffstat (limited to 'src/c/quikr_functions.h')
-rw-r--r-- | src/c/quikr_functions.h | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/src/c/quikr_functions.h b/src/c/quikr_functions.h index 1826427..6ebde00 100644 --- a/src/c/quikr_functions.h +++ b/src/c/quikr_functions.h @@ -1,11 +1,11 @@ // count the sequences in a fasta file -int count_sequences(char *filename); +unsigned long long count_sequences(const char *filename); // normalize a matrix by dividing each element by the sum of it's column void normalize_matrix(double *matrix, int height, int width); // load a sensing matrix -double *load_sensing_matrix(char *filename, int height, int width); +struct sensing_matrix *load_sensing_matrix(const char *filename); // load a count matrix double *load_count_matrix(char *filename, int width, int kmer); |