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authorCalvin Morrison <mutantturkey@gmail.com>2013-11-26 10:37:12 -0500
committerCalvin Morrison <mutantturkey@gmail.com>2013-11-26 10:37:12 -0500
commitfc0ef29e1aa74b13dc1f179ac755b8bf784af9bb (patch)
treea76fda96bba4347c0e3b110cac9033e2d3430b9b /src/c/quikr_functions.c
parent9066ea884129957fe899d6d10cba1e17547214b9 (diff)
working single threaded multifasta with rarity
Diffstat (limited to 'src/c/quikr_functions.c')
-rw-r--r--src/c/quikr_functions.c18
1 files changed, 0 insertions, 18 deletions
diff --git a/src/c/quikr_functions.c b/src/c/quikr_functions.c
index a6366be..fa97440 100644
--- a/src/c/quikr_functions.c
+++ b/src/c/quikr_functions.c
@@ -61,24 +61,6 @@ void normalize_matrix(double *matrix, unsigned long long height, unsigned long l
}
}
-double *setup_count_matrix(char *filename, unsigned long long kmer, unsigned long long lambda, unsigned long long width) {
-
- unsigned long long x = 0;
- unsigned long long *integer_counts = get_kmer_counts_from_file(filename, kmer);
- double *count_matrix = malloc(width * sizeof(double));
- check_malloc(count_matrix, NULL);
-
- count_matrix[0] = 0;
-
- for(x = 1; x < width; x++) {
- count_matrix[x] = (double)integer_counts[x-1];
- }
-
- free(integer_counts);
-
- return count_matrix;
-}
-
unsigned long long count_sequences(const char *filename) {
char *line = NULL;
size_t len = 0;