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Tools for parsing FASTA files very fast
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kmer_utils.h
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2014-03-12
reverse compliment
Calvin Morrison
2014-03-06
update readme, add a check_null_ptr function to clear up clutter
Calvin Morrison
2014-03-06
add kmer_continuous_count
Calvin Morrison
2014-02-02
add a helper function for python
Calvin Morrison
2014-02-01
remove str alloc and replace inside s for strstr
Calvin Morrison
2014-02-01
change headers, organize
Calvin Morrison
2014-01-30
kmer_count_per_sequence: add option to load specific mers from file, add mult...
Calvin Morrison
2013-11-11
fix warnings
Calvin Morrison
2013-10-16
reorder kmer_utils.h, actually take a kmer value as argv[2] for frequency, er...
Calvin Morrison
2013-10-16
kmer utils.h
Calvin Morrison
2013-10-02
use an external iterator so that we can skip over anything in range of an errorw
Calvin Morrison
2013-10-02
update header
Calvin Morrison
2013-10-01
update headers, use const for better performance (.500ms on ~2gb file), updat...
Calvin Morrison
2013-09-10
Initial commit of some kmer utilities.
Calvin Morrison