| Age | Commit message (Expand) | Author |
|---|
| 2014-04-18 | add OSX support, or any supprot for people without getline | Calvin Morrison |
| 2014-04-15 | TODOs for performance ideas | Calvin Morrison |
| 2014-04-14 | small performance bump. don't strlen a file when we know it's len from strnstrip | Calvin Morrison |
| 2014-04-14 | add some testing scripts i have had laying around, some fasta files, and make... | Calvin Morrison |
| 2014-04-09 | MERGE sparse trunk into master | Calvin Morrison |
| 2014-03-12 | reverse compliment | Calvin Morrison |
| 2014-03-06 | update readme, add a check_null_ptr function to clear up clutter | Calvin Morrison |
| 2014-03-06 | add kmer_continuous_count | Calvin Morrison |
| 2014-02-24 | add more verbose error messages and add more memory checks | Calvin Morrison |
| 2014-02-04 | don't inline hint, breaks clang | Calvin Morrison |
| 2014-02-02 | add a helper function for python | Calvin Morrison |
| 2014-02-02 | add comment | Calvin Morrison |
| 2014-02-01 | remove str alloc and replace inside s for strstr | Calvin Morrison |
| 2014-02-01 | use proper types, fix warnings, declare vars at top of section, take FILE in... | Calvin Morrison |
| 2014-02-01 | fix spacing | Calvin Morrison |
| 2014-02-01 | update types of functions, remove non existant include and se size_t for strn... | Calvin Morrison |
| 2014-01-30 | kmer_count_per_sequence: add option to load specific mers from file, add mult... | Calvin Morrison |
| 2014-01-07 | fix kmer_counts_per_sequence, make sure we convert the array fully, and updat... | Calvin Morrison |
| 2013-11-24 | performance boost from skipping our first newline. It seems crazy, but this c... | Calvin Morrison |
| 2013-11-23 | fix labels, fix spelling of position | Calvin Morrison |
| 2013-11-23 | better allocation of memory, make sure to free other memory | Calvin Morrison |
| 2013-11-15 | Merge branch 'master' of github.com:mutantturkey/dna-utils | Calvin Morrison |
| 2013-11-15 | instead of bitshift, use a equality operator | Calvin Morrison |
| 2013-11-11 | fix memleak | Calvin Morrison |
| 2013-11-11 | index to kmerfunction | Calvin Morrison |
| 2013-10-17 | update kmer utils | Calvin Morrison |
| 2013-10-16 | added new functions | Calvin Morrison |
| 2013-10-04 | no more branching | Calvin Morrison |
| 2013-10-02 | use an external iterator so that we can skip over anything in range of an errorw | Calvin Morrison |
| 2013-10-02 | remove unused headers | Calvin Morrison |
| 2013-10-01 | update headers, use const for better performance (.500ms on ~2gb file), updat... | Calvin Morrison |
| 2013-09-28 | idea | Calvin Morrison |
| 2013-09-14 | improve performance of convert_kmer_to_index by using a bitwise OR to convert... | Calvin Morrison |
| 2013-09-12 | don't use strtol | Calvin Morrison |
| 2013-09-11 | update convert_kmer_to_index for brevity and clarity | Calvin Morrison |
| 2013-09-11 | add headers | Calvin Morrison |
| 2013-09-10 | Initial commit of some kmer utilities. | Calvin Morrison |
