Age | Commit message (Expand) | Author |
2014-01-18 | Add initial, non working version | orbitz |
2014-01-18 | Fix compiler warnings | orbitz |
2014-01-17 | add in pointer fix | Calvin Morrison |
2014-01-17 | fix pointer | Calvin Morrison |
2014-01-16 | update translate function | Calvin Morrison |
2014-01-16 | add a fread_save_n_bytes function | Calvin Morrison |
2014-01-15 | fix spacing | Calvin Morrison |
2014-01-15 | start using fread, still not working | Calvin Morrison |
2014-01-15 | add handling for overrunning the string length, and if there's a skip char in... | Calvin Morrison |
2014-01-15 | add a fix for skip char | Calvin Morrison |
2014-01-15 | fix counting to not be reversed, remove is_whitespace is_error_char and inste... | Calvin Morrison |
2013-12-31 | Remove need for strnstrip | orbitz |
2013-12-31 | Make functions static, move inner loop out to a function | orbitz |
2013-12-31 | Refactor out translation and error checking | orbitz |
2013-12-31 | Iterate in other direction | orbitz |
2013-12-31 | Remove fclose of file handle | orbitz |
2013-12-29 | Remove this shared thing... | orbitz |
2013-12-29 | Flip impossible ordering | orbitz |
2013-12-29 | Clneaup some whitespace, change how calloc called | orbitz |
2013-12-29 | Namespace all the functions and make private ones static | orbitz |
2013-12-29 | Clean up signed comparison warnings | orbitz |
2013-12-29 | Remove useless inline decorator | orbitz |
2013-12-29 | Align and label lookup map | orbitz |
2013-12-29 | Refactor to pull opening the file out of the count function | orbitz |
2013-12-29 | Cleanup indentation and whitespace | orbitz |
2013-11-24 | performance boost from skipping our first newline. It seems crazy, but this c... | Calvin Morrison |
2013-11-23 | fix labels, fix spelling of position | Calvin Morrison |
2013-11-23 | better allocation of memory, make sure to free other memory | Calvin Morrison |
2013-11-15 | Merge branch 'master' of github.com:mutantturkey/dna-utils | Calvin Morrison |
2013-11-15 | instead of bitshift, use a equality operator | Calvin Morrison |
2013-11-11 | fix memleak | Calvin Morrison |
2013-11-11 | index to kmerfunction | Calvin Morrison |
2013-10-17 | update kmer utils | Calvin Morrison |
2013-10-16 | added new functions | Calvin Morrison |
2013-10-04 | no more branching | Calvin Morrison |
2013-10-02 | use an external iterator so that we can skip over anything in range of an errorw | Calvin Morrison |
2013-10-02 | remove unused headers | Calvin Morrison |
2013-10-01 | update headers, use const for better performance (.500ms on ~2gb file), updat... | Calvin Morrison |
2013-09-28 | idea | Calvin Morrison |
2013-09-14 | improve performance of convert_kmer_to_index by using a bitwise OR to convert... | Calvin Morrison |
2013-09-12 | don't use strtol | Calvin Morrison |
2013-09-11 | update convert_kmer_to_index for brevity and clarity | Calvin Morrison |
2013-09-11 | add headers | Calvin Morrison |
2013-09-10 | Initial commit of some kmer utilities. | Calvin Morrison |