| Age | Commit message (Expand) | Author |
|---|
| 2014-04-18 | add OSX support, or any supprot for people without getline | Calvin Morrison |
| 2014-04-09 | MERGE sparse trunk into master | Calvin Morrison |
| 2014-03-12 | update cli for reverse-compliment counting | Calvin Morrison |
| 2014-02-06 | whoops, count even if it's zero | Calvin Morrison |
| 2014-02-01 | add --help | Calvin Morrison |
| 2014-02-01 | backport stdin reading | Calvin Morrison |
| 2014-02-01 | use false instead of 0 | Calvin Morrison |
| 2014-02-01 | add help function | Calvin Morrison |
| 2014-01-31 | remove commas | Calvin Morrison |
| 2014-01-31 | add --help text for kmer_total_count | Calvin Morrison |
| 2013-11-23 | better allocation of memory, make sure to free other memory | Calvin Morrison |
| 2013-11-11 | fix warnings | Calvin Morrison |
| 2013-11-11 | fix printf | Calvin Morrison |
| 2013-11-11 | added label and nonzero options | Calvin Morrison |
| 2013-11-07 | rename to counts per sequence, don't provide frequencies only counts | Calvin Morrison |
| 2013-10-23 | output individual kmers if requested | Calvin Morrison |
| 2013-10-16 | reorder kmer_utils.h, actually take a kmer value as argv[2] for frequency, er... | Calvin Morrison |
| 2013-10-16 | works with multiline sequences, abstracted most code to kmer_utils.c | Calvin Morrison |
| 2013-10-10 | don't use the num_to_index function for more speeeeed | Calvin Morrison |
| 2013-10-10 | don't depend on math.h's POW by using a bitshift instead: | Calvin Morrison |
| 2013-10-04 | no more branching | Calvin Morrison |
| 2013-10-02 | provide errno error details | Calvin Morrison |
| 2013-10-02 | formatting | Calvin Morrison |
| 2013-10-02 | use an external iterator so that we can skip over anything in range of an errorw | Calvin Morrison |
| 2013-10-02 | add check for line length. if read > kmer we are good to go | Calvin Morrison |
| 2013-10-01 | update headers, use const for better performance (.500ms on ~2gb file), updat... | Calvin Morrison |
| 2013-09-28 | idea | Calvin Morrison |
| 2013-09-14 | improve performance of convert_kmer_to_index by using a bitwise OR to convert... | Calvin Morrison |
| 2013-09-13 | don't use strlen(line) when we already have that in the read variable | Calvin Morrison |
| 2013-09-11 | use right types | Calvin Morrison |
| 2013-09-11 | move declarations to top, make sure to use the appropriate type | Calvin Morrison |
| 2013-09-11 | add headers | Calvin Morrison |
| 2013-09-10 | Initial commit of some kmer utilities. | Calvin Morrison |
