diff options
Diffstat (limited to 'kmer_total_count.c')
| -rw-r--r-- | kmer_total_count.c | 7 |
1 files changed, 3 insertions, 4 deletions
diff --git a/kmer_total_count.c b/kmer_total_count.c index 12f9ab4..c55ffa5 100644 --- a/kmer_total_count.c +++ b/kmer_total_count.c @@ -6,7 +6,6 @@ #include <string.h> #include <getopt.h> -#include "sparse.h" #include "kmer_utils.h" @@ -117,12 +116,12 @@ int main(int argc, char **argv) { } if(kmer > 12 || force_sparse) { - node *root = get_sparse_kmer_counts_from_file(fh, kmer); - print_sparse(root, label, nonzero, kmer); + kmer_map *counts = get_sparse_kmer_counts_from_file(fh, kmer); + print_kmer(counts, label, nonzero, kmer); } else { unsigned long long *counts = get_dense_kmer_counts_from_file(fh, kmer); - print_dense(counts, label, nonzero, kmer); + print_kmer(counts, label, nonzero, kmer); } return EXIT_SUCCESS; |