diff options
Diffstat (limited to 'kmer_total_count.c')
| -rw-r--r-- | kmer_total_count.c | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/kmer_total_count.c b/kmer_total_count.c index 48e64b5..23ca512 100644 --- a/kmer_total_count.c +++ b/kmer_total_count.c @@ -41,11 +41,11 @@ int main(int argc, char **argv) { exit(EXIT_FAILURE); while ((read = getline(&line, &len, fh)) != -1) { - if(line[0] != '>') { - for(i = 0; i < strlen(line) - kmer; i++) { + if(line[0] != '>') { + for(i = 0; i < read - kmer; i++) { counts[convert_kmer_to_index(&line[i],kmer, width)]++; } - } + } } for(i = 0; i < width; i++) |