diff options
| -rw-r--r-- | kmer_counts_per_sequence.c | 2 | ||||
| -rw-r--r-- | kmer_utils.c | 2 |
2 files changed, 2 insertions, 2 deletions
diff --git a/kmer_counts_per_sequence.c b/kmer_counts_per_sequence.c index 66accc8..fceb17e 100644 --- a/kmer_counts_per_sequence.c +++ b/kmer_counts_per_sequence.c @@ -45,7 +45,7 @@ int main(int argc, char **argv) { // reset our count matrix to zero memset(counts, 0, width * sizeof(unsigned long long)); - for(i = 0; i < read - kmer; i++) { + for(i = 0; i < read; i++) { line[i] = alpha[(int)line[i]]; } diff --git a/kmer_utils.c b/kmer_utils.c index dc79700..2b3ce67 100644 --- a/kmer_utils.c +++ b/kmer_utils.c @@ -34,7 +34,7 @@ inline unsigned long num_to_index(const char *str, const int kmer, const long er for(i = kmer - 1; i >= 0; i--){ - if(str[i] >> 2) { + if(str[i] == 5) { #ifndef SHARED position += i; #endif |