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-rw-r--r--kmer_total_count.c2
-rw-r--r--kmer_utils.c7
2 files changed, 7 insertions, 2 deletions
diff --git a/kmer_total_count.c b/kmer_total_count.c
index 57d4fcc..f15b69c 100644
--- a/kmer_total_count.c
+++ b/kmer_total_count.c
@@ -116,5 +116,7 @@ int main(int argc, char **argv) {
}
}
}
+
+ free(counts);
return EXIT_SUCCESS;
}
diff --git a/kmer_utils.c b/kmer_utils.c
index b29cd24..6736279 100644
--- a/kmer_utils.c
+++ b/kmer_utils.c
@@ -52,7 +52,7 @@ inline unsigned long num_to_index(const char *str, const int kmer, const long er
char *index_to_kmer(unsigned long long index, long kmer) {
int num_array[64];
- char *ret = malloc(64);
+ char *ret = calloc(64, sizeof(char));
if(ret == NULL)
exit(EXIT_FAILURE);
@@ -117,7 +117,7 @@ unsigned long long * get_kmer_counts_from_file(const char *fn, const unsigned in
const unsigned long width = pow_four(kmer);
// malloc our return array
- unsigned long long * counts = malloc((width+ 1) * sizeof(unsigned long long));
+ unsigned long long * counts = calloc((width+ 1), sizeof(unsigned long long));
if(counts == NULL) {
fprintf(stderr, strerror(errno));
exit(EXIT_FAILURE);
@@ -186,5 +186,8 @@ unsigned long long * get_kmer_counts_from_file(const char *fn, const unsigned in
}
free(line);
+ free(str);
+ fclose(fh);
+
return counts;
}