diff options
Diffstat (limited to 'README.md')
| -rw-r--r-- | README.md | 6 |
1 files changed, 4 insertions, 2 deletions
@@ -42,7 +42,9 @@ Y | tmp_directory=$output_directory/.tmp | temporary files directory Y | max_melting_temp | 30° | maximum melting temp of mers Y | min_melting_temp | 0° | minimum melting temp of mers Y | min_mer_count | Not Enabled (0) | only select mers that occur more frequently than this number -Y | max_select | maximum number of mers to pick -Y | ignore_mers | Not Enabled | mers to explicitly ignore, space seperated ex. ignore_mers="ACAGTA ACCATAA ATATATAT" +Y | max\_select | maximum number of mers to pick +Y | ignore\_mers | Not Enabled | mers to explicitly ignore, space seperated ex. ignore\_mers="ACAGTA ACCATAA ATATATAT" Y | foreground | Not Enabled | path of foreground file Y | background | Not Enabled | path of background file +Y | max\_consecutive\_binding | 4 | The maxium number of consecutive binding nucleotides in homodimer and heterodimers + |