diff options
| -rwxr-xr-x | SelectiveGenomeAmplification | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/SelectiveGenomeAmplification b/SelectiveGenomeAmplification index d5e1780..543f90b 100755 --- a/SelectiveGenomeAmplification +++ b/SelectiveGenomeAmplification @@ -34,7 +34,7 @@ fi : ${max_mer_distance=5000} # min/maximum kmer meling point : ${max_melting_temp=30} -: ${min_melting_temp=0} +: ${min_melting_temp=18} # minimum mer count : ${min_mer_count=0} # maximum mers to pick @@ -120,7 +120,7 @@ if [ "$ignore_mers" ]; then fi echo "outputing current run parameters" -for var in ignore_mers min_mer_range max_mer_range max_select min_mer_count max_mer_distance max_melting_temp min_melting_temp; do +for var in ignore_mers min_mer_range max_mer_range max_select min_mer_count max_mer_distance max_melting_temp min_melting_temp foreground background; do echo $var "${!var}" >> $output_directory/$current_run/parameters done; |