diff options
| -rwxr-xr-x | src/score_mers.py | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/src/score_mers.py b/src/score_mers.py index 5cfb974..7fa2b53 100755 --- a/src/score_mers.py +++ b/src/score_mers.py @@ -20,9 +20,12 @@ if(len(sys.argv) == 5): fg_fasta_fn = sys.argv[2] bg_fasta_fn = sys.argv[3] output_file = sys.argv[4] + + fg_genome_length = os.path.getsize(fg_fasta_fn) + bg_genome_length = os.path.getsize(bg_fasta_fn) else: print "please specify your inputs" - print "ex: select_mers.py fg_counts_file fg_fasta_file bg_counts_file bg_fasta_file output_file" + print "ex: score_mers.py selectivity_file fg_fasta_file bg_fasta_file" exit() # empty class to fill up mer information with |