diff options
| -rwxr-xr-x | SelectiveGenomeAmplification.sh (renamed from select_kmers.sh) | 6 |
1 files changed, 2 insertions, 4 deletions
diff --git a/select_kmers.sh b/SelectiveGenomeAmplification.sh index 3d10bcd..2b43a47 100755 --- a/select_kmers.sh +++ b/SelectiveGenomeAmplification.sh @@ -9,12 +9,10 @@ # temp directory : ${tmp_directory=$PWD/tmp} # min/maximum kmer melting point -: ${max_melting_temp=18} +: ${max_melting_temp=30} : ${min_melting_temp=0} # minimum mer count -# ! you can supply either a percentage like this .5 -# ! or you can supply a raw number (100) -: ${min_mer_count=1000} +: ${min_mer_count=0} # maximum mers to pick : ${max_select=15} # mers to specifically IGNORE, space delimited |