add filtering based on consecutive mer lengths

1 files changed, 0 insertions, 58 deletions

diff --git a/src/melting_range.c b/src/melting_range.c
deleted file mode 100644
index 2c89195..0000000
--- a/src/melting_range.c
+++ /dev/null
@@ -1,58 +0,0 @@
-#include <stdlib.h>
-#include <stdio.h>
-#include <string.h>
-#include <unistd.h>
-
-float melting_temperature(char *mer) {
-
-	float a = 0;
-	float c = 0;
-	float g = 0;
-	float t = 0;
-	int i = 0;
-
-	for(i = 0; i < strlen(mer); i++) {
-		switch(mer[i]) {
-			case 'A':
-			a++;
-			break;
-			case 'C':
-			c++;
-			break;
-			case 'G':
-			g++;
-			break;
-			case 'T':
-			t++;
-			break;
-			default:
-			break;
-		}
-	}
-
-	if(strlen(mer) < 13)
-		return  ((a+t) * 2) + ((c+g) * 4);
-	else
-		return 64.9 + 41.0*(g+c-16.4)/(a+t+g+c);
-}
-
-int main(int argc, char **argv){
-
-	if(argc < 3) {
-		printf("please supply the min and max as stdargs");
-		exit(EXIT_FAILURE);
-	}
-	float min = atof(argv[1]);
-	float max = atof(argv[2]);
-	
-	char mer[24] = { 0 };
-	int count = 0;
-
-	while(fscanf(stdin, "%s\t%d\n", &mer, &count) == 2) {
-		float temp = melting_temperature(mer);
-		if( (temp > min) && (temp < max) )
-			printf("%s\t%d\n", mer, count);
-	}
-
-	exit(EXIT_SUCCESS);
-}