| Age | Commit message (Expand) | Author |
|---|
| 2013-06-11 | use longs instead of ints, fix a mistake in the --help | Calvin |
| 2013-06-10 | finish gzip decoding, YOU MUST retrain your api | Calvin |
| 2013-06-10 | native zlib decoding for quikr/multifasta, was done earlier but never commite... | Calvin |
| 2013-06-10 | remove unused variable | Calvin |
| 2013-06-07 | quikrCustomTranied was not using the specified kmer. Use the correct kmer and... | Calvin Morrison |
| 2013-06-07 | free getline's calls | Calvin Morrison |
| 2013-06-07 | updated help text and manpages | Calvin |
| 2013-06-06 | fixed a malloc error, and fixed some strings | Calvin |
| 2013-05-28 | modified quikrTrain.m to not depend on a mer file, instead use the generate_k... | Calvin |
| 2013-05-28 | removed files | Calvin |
| 2013-05-28 | removed unused nbc code | Calvin |
| 2013-05-20 | use n*n*n instead on n*n for nnls | Calvin |
| 2013-05-20 | updated documentation strings, add man page to be installed globally | Calvin |
| 2013-05-19 | native gzip decoding | Calvin Morrison |
| 2013-05-16 | used newlines in readme for clarity, update our references to the ../../../data/ | Calvin |
| 2013-05-15 | python: add some more descriptive comments, use lamb instead of default lamb | Calvin |
| 2013-05-15 | removed the bsd license | Calvin |
| 2013-05-15 | added file checking for multifasta_to_otu | Calvin |
| 2013-05-15 | add some error checking | Calvin |
| 2013-05-15 | cleanup kmer/lambda default values | Calvin |
| 2013-05-15 | add -d flag for debugging so verbose doesn't take longer, use generate_kmers ... | Calvin |
| 2013-05-14 | release1.0 | Calvin |
| 2013-05-14 | add some documentation | Calvin |
| 2013-05-14 | delete spurious print | Calvin |
| 2013-05-14 | fixed kmer argument bug | Calvin |
| 2013-05-14 | use sensing matrix | Calvin |
| 2013-05-14 | remove generate kmers from quikr | Calvin |
| 2013-05-14 | have matlab use global executables | Calvin |
| 2013-05-14 | generate kmers should stand alone | Calvin |
| 2013-05-14 | remove probabilties by read | Calvin |
| 2013-05-10 | don't use an output directory, and use basename's for the OTU_table | Calvin |
| 2013-05-03 | multifasta now reads .fa and fasta file sonly | Calvin |
| 2013-05-03 | modified command line arguments | Calvin |
| 2013-05-03 | use a default kmer size of six | Calvin |
| 2013-05-03 | updated documentation , added multi_gg_final.m | Calvin |
| 2013-05-03 | added a contributor | Calvin |
| 2013-05-03 | do some very basic error checking on generate_kmers | Calvin |
| 2013-05-03 | added nbc classifier source | Calvin |
| 2013-03-26 | add / when reading back in, and sort our input list | Calvin |
| 2013-03-26 | added / to output file name | Calvin |
| 2013-03-18 | use env to find python | Calvin |
| 2013-03-18 | Merge remote-tracking branch 'origin/master' | Calvin |
| 2013-03-18 | don't try and force 2.7, it might not work | Calvin |
| 2013-03-18 | remove checking, seems like the sml code isn't returning sane values | mutantturkey |
| 2013-03-16 | add return code checking | mutantturkey |
| 2013-03-16 | use is_compressed | mutantturkey |
| 2013-03-16 | we don't need a kmer file anymore :-) | mutantturkey |
| 2013-03-15 | eliminated the need for Nmers.txt:-) | Calvin |
| 2013-03-15 | delete binaries | Calvin |
| 2013-03-15 | nbc added | Calvin |
