quikr.git - Quikr - a bio classifier based on NNLS

Age	Commit message (Expand)	Author
2013-05-14	remove probabilties by read	Calvin
2013-05-10	don't use an output directory, and use basename's for the OTU_table	Calvin
2013-05-03	multifasta now reads .fa and fasta file sonly	Calvin
2013-05-03	modified command line arguments	Calvin
2013-05-03	use a default kmer size of six	Calvin
2013-05-03	updated documentation , added multi_gg_final.m	Calvin
2013-05-03	added a contributor	Calvin
2013-05-03	do some very basic error checking on generate_kmers	Calvin
2013-05-03	added nbc classifier source	Calvin
2013-03-26	add / when reading back in, and sort our input list	Calvin
2013-03-26	added / to output file name	Calvin
2013-03-18	use env to find python	Calvin
2013-03-18	Merge remote-tracking branch 'origin/master'	Calvin
2013-03-18	don't try and force 2.7, it might not work	Calvin
2013-03-18	remove checking, seems like the sml code isn't returning sane values	mutantturkey
2013-03-16	add return code checking	mutantturkey
2013-03-16	use is_compressed	mutantturkey
2013-03-16	we don't need a kmer file anymore :-)	mutantturkey
2013-03-15	eliminated the need for Nmers.txt:-)	Calvin
2013-03-15	delete binaries	Calvin
2013-03-15	nbc added	Calvin
2013-03-15	specify python2.7	Calvin
2013-03-15	specify python 2.7 in multifasta	Calvin
2013-03-15	updated multifasta_to_otu to is_compressed	Calvin
2013-03-14	formatting fixes and renamed isCompressed to is_compressed	Calvin
2013-03-14	fix automatically creating output directory	Calvin
2013-03-14	fix multifasta_to_otu to use proper function names... need to get some automa...	Calvin
2013-03-14	fixed an incorrect namespace	Calvin
2013-03-14	get rid of OS checks for count, assume it is called count-kmers	Calvin
2013-03-14	re-add the kmer filename checK	Calvin
2013-03-13	fix bad old commit	Calvin
2013-03-13	added setup.py for python quikr module	Calvin
2013-03-12	removed multifasta's py extension, modified the --help argument output for q...	Calvin
2013-03-11	move python stuff to python directory	Calvin
2013-03-11	adding matlab code	Calvin
2013-03-08	moving some stuff	Calvin