Age | Commit message (Expand) | Author |
2013-10-31 | fix memset | Calvin Morrison |
2013-10-31 | formatting changes for quikr | Calvin Morrison |
2013-10-31 | return 0 instead of exit_failure in count_sequences, and remove the newline f... | Calvin Morrison |
2013-10-31 | exit if no sequences | Calvin Morrison |
2013-10-31 | fix a bug so we only read when the length is greater han the kmer | Calvin Morrison |
2013-10-29 | remove the fasta file requirement for multifasta, and no longer parse headers... | Calvin Morrison |
2013-10-29 | initial commit of multifasta_to_otu.c working with new format | Calvin Morrison |
2013-10-29 | update tpyes for quikr_train.c | Calvin Morrison |
2013-10-29 | update types for quikr_functions | Calvin Morrison |
2013-10-29 | update types and check malloc | Calvin Morrison |
2013-10-29 | append variables in makefile to reduce redundancy | Calvin Morrison |
2013-10-29 | use type in memset, add +1 to our matrix width | Calvin Morrison |
2013-10-29 | update errors from load_sensing_matrix | Calvin Morrison |
2013-10-29 | update quikr to work with internally parsed sensing matrix | Calvin Morrison |
2013-10-29 | update header | Calvin Morrison |
2013-10-29 | fix memset in quikr_train as weel | Calvin Morrison |
2013-10-29 | Fix a nasty bug in kmer-counting code | Calvin Morrison |
2013-10-28 | update kmer utils | Calvin Morrison |
2013-10-28 | New sensing matrix format | Calvin Morrison |
2013-10-28 | update Makefile to be more sane and use targets correctly | Calvin Morrison |
2013-10-28 | Update quikr_functions to read our sensing format | Calvin Morrison |
2013-10-18 | add kmercounting code from dna-utils. update our make file to support debuggi... | Calvin Morrison |
2013-09-05 | last fixes for 1.0.4v1.0.4 | Calvin Morrison |
2013-09-05 | bump to version v1.0.4 | Calvin Morrison |
2013-09-05 | Remove debugging version | Calvin Morrison |
2013-08-29 | parse -h and --help and print out the help message | Calvin Morrison |
2013-08-16 | Merge branch 'master' of github.com:mutantturkey/quikr | Calvin Morrison |
2013-08-16 | remove unused case | Calvin Morrison |
2013-06-13 | use readdir and #omp criticalv1.0.3 | Calvin |
2013-06-12 | fix case | Calvin |
2013-06-12 | add --version and -V | Calvin |
2013-06-12 | use larger size for count_commmand, remove extra quotes, and fix a broken che... | Calvin Morrison |
2013-06-11 | remove file | Calvin Morrison |
2013-06-11 | remove extra word | Calvin |
2013-06-11 | updated functions with long | Calvin |
2013-06-11 | use int64_t for NNLS to avoid overflow issues | Calvin |
2013-06-11 | small edits to man page | Calvin |
2013-06-11 | use longs instead of ints, fix a mistake in the --help | Calvin |
2013-06-10 | finish gzip decoding, YOU MUST retrain your api | Calvin |
2013-06-10 | native zlib decoding for quikr/multifasta, was done earlier but never commite... | Calvin |
2013-06-10 | remove unused variable | Calvin |
2013-06-07 | free getline's calls | Calvin Morrison |
2013-06-07 | updated help text and manpages | Calvin |
2013-06-06 | fixed a malloc error, and fixed some strings | Calvin |
2013-05-20 | use n*n*n instead on n*n for nnls | Calvin |
2013-05-20 | updated documentation strings, add man page to be installed globally | Calvin |
2013-05-19 | native gzip decoding | Calvin Morrison |
2013-05-15 | added file checking for multifasta_to_otu | Calvin |
2013-05-15 | add some error checking | Calvin |
2013-05-15 | cleanup kmer/lambda default values | Calvin |