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Quikr - a bio classifier based on NNLS
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Author
2013-06-07
free getline's calls
Calvin Morrison
2013-06-07
updated help text and manpages
Calvin
2013-06-06
updated Changelog
Calvin
2013-06-06
fixed a malloc error, and fixed some strings
Calvin
2013-06-05
addd mlton as dependency
Calvin
2013-06-05
update links
Calvin
2013-05-28
Added not about generate_kmers
Calvin Morrison
2013-05-28
Updated README for github
Calvin Morrison
2013-05-28
remove 6mers.txt
Calvin
2013-05-28
modified quikrTrain.m to not depend on a mer file, instead use the generate_k...
Calvin
2013-05-28
removed files
Calvin
2013-05-28
removed unused nbc code
Calvin
2013-05-28
added license
Calvin
2013-05-20
use n*n*n instead on n*n for nnls
Calvin
2013-05-20
new release notes
v1.0.2
Calvin
2013-05-20
updated documentation strings, add man page to be installed globally
Calvin
2013-05-19
native gzip decoding
Calvin Morrison
2013-05-16
new changelog
v1.0.1
Calvin
2013-05-16
update readme
Calvin
2013-05-16
used newlines in readme for clarity, update our references to the ../../../data/
Calvin
2013-05-15
python: add some more descriptive comments, use lamb instead of default lamb
Calvin
2013-05-15
removed extra whitespace
Calvin
2013-05-15
move the readme
Calvin
2013-05-15
removed the bsd license
Calvin
2013-05-15
fixes for readme.markdown
Calvin
2013-05-15
use consistent headers
Calvin
2013-05-15
remove extra spaces
Calvin
2013-05-15
fix a move
Calvin
2013-05-15
rename readme
Calvin
2013-05-15
change links to work for github
Calvin
2013-05-15
added file checking for multifasta_to_otu
Calvin
2013-05-15
add some error checking
Calvin
2013-05-15
cleanup kmer/lambda default values
Calvin
2013-05-15
add -d flag for debugging so verbose doesn't take longer, use generate_kmers ...
Calvin
2013-05-14
release1.0
Calvin
2013-05-14
updated docs
Calvin
2013-05-14
update makefile to include c
Calvin
2013-05-14
add some documentation
Calvin
2013-05-14
delete spurious print
Calvin
2013-05-14
fixed kmer argument bug
Calvin
2013-05-14
use sensing matrix
Calvin
2013-05-14
add readme
Calvin
2013-05-14
remove generate kmers from quikr
Calvin
2013-05-14
have matlab use global executables
Calvin
2013-05-14
generate kmers should stand alone
Calvin
2013-05-14
remove probabilties by read
Calvin
2013-05-10
don't use an output directory, and use basename's for the OTU_table
Calvin
2013-05-03
multifasta now reads .fa and fasta file sonly
Calvin
2013-05-03
modified command line arguments
Calvin
2013-05-03
use a default kmer size of six
Calvin
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