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2013-06-05update linksCalvin
2013-05-28Added not about generate_kmersCalvin Morrison
Added notes to the matlab documentation about the generate kmers requirement.
2013-05-28Updated README for githubCalvin Morrison
Link properly to our documentation in github, as well as LICENSE file.
2013-05-28remove 6mers.txtCalvin
2013-05-28modified quikrTrain.m to not depend on a mer file, instead use the ↵Calvin
generate_kmers
2013-05-28removed filesCalvin
2013-05-28removed unused nbc codeCalvin
2013-05-28added licenseCalvin
2013-05-20use n*n*n instead on n*n for nnlsCalvin
2013-05-20new release notesv1.0.2Calvin
2013-05-20updated documentation strings, add man page to be installed globallyCalvin
2013-05-19native gzip decodingCalvin Morrison
2013-05-16new changelogv1.0.1Calvin
2013-05-16update readmeCalvin
2013-05-16used newlines in readme for clarity, update our references to the ../../../data/Calvin
2013-05-15python: add some more descriptive comments, use lamb instead of default lambCalvin
2013-05-15removed extra whitespaceCalvin
2013-05-15move the readmeCalvin
2013-05-15removed the bsd licenseCalvin
2013-05-15fixes for readme.markdownCalvin
2013-05-15use consistent headersCalvin
2013-05-15remove extra spacesCalvin
2013-05-15fix a moveCalvin
2013-05-15rename readmeCalvin
2013-05-15change links to work for githubCalvin
2013-05-15added file checking for multifasta_to_otuCalvin
2013-05-15add some error checkingCalvin
2013-05-15cleanup kmer/lambda default valuesCalvin
2013-05-15add -d flag for debugging so verbose doesn't take longer, use generate_kmers ↵Calvin
instead of a hacky awk
2013-05-14release1.0Calvin
2013-05-14updated docsCalvin
2013-05-14update makefile to include cCalvin
2013-05-14add some documentationCalvin
2013-05-14delete spurious printCalvin
2013-05-14fixed kmer argument bugCalvin
2013-05-14use sensing matrixCalvin
2013-05-14add readmeCalvin
2013-05-14remove generate kmers from quikrCalvin
2013-05-14have matlab use global executablesCalvin
2013-05-14generate kmers should stand aloneCalvin
2013-05-14remove probabilties by readCalvin
2013-05-10don't use an output directory, and use basename's for the OTU_tableCalvin
2013-05-03multifasta now reads .fa and fasta file sonlyCalvin
2013-05-03modified command line argumentsCalvin
2013-05-03use a default kmer size of sixCalvin
2013-05-03updated documentation , added multi_gg_final.mCalvin
2013-05-03added a contributorCalvin
2013-05-03do some very basic error checking on generate_kmersCalvin
2013-05-03added updated cli documentationCalvin
2013-05-03added nbc classifier sourceCalvin
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