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AgeCommit message (Expand)Author
2013-10-28update Makefile to be more sane and use targets correctlyCalvin Morrison
2013-10-28Update quikr_functions to read our sensing formatCalvin Morrison
2013-10-18add kmercounting code from dna-utils. update our make file to support debuggi...Calvin Morrison
2013-09-05last fixes for 1.0.4v1.0.4Calvin Morrison
2013-09-05bump to version v1.0.4Calvin Morrison
2013-09-05Merge branch 'master' of github.com:mutantturkey/quikrCalvin Morrison
2013-09-05build nbc and c before we install quikrCalvin Morrison
2013-09-05update cli.markdown to remove debugCalvin Morrison
2013-09-05Remove debugging versionCalvin Morrison
2013-09-05README formattingCalvin Morrison
2013-09-05Merge branch 'master' of github.com:EESI/quikrCalvin Morrison
2013-08-30Update cli.markdownCalvin Morrison
2013-08-29parse -h and --help and print out the help messageCalvin Morrison
2013-08-20Don't escape _'sCalvin Morrison
2013-08-16Merge branch 'master' of github.com:EESI/quikrCalvin Morrison
2013-08-16Merge branch 'master' of github.com:mutantturkey/quikrCalvin Morrison
2013-08-16remove unused caseCalvin Morrison
2013-08-12Merge pull request #1 from gailrosen/patch-1Calvin Morrison
2013-08-12Update matlab.markdowngailrosen
2013-06-13use readdir and #omp criticalv1.0.3Calvin
2013-06-12update multifasta pathsCalvin
2013-06-12fix caseCalvin
2013-06-12update documention to include current argumentsCalvin
2013-06-12fix missing commaCalvin
2013-06-12update version to v1.0.3Calvin
2013-06-12add --version and -VCalvin
2013-06-12use larger size for count_commmand, remove extra quotes, and fix a broken che...Calvin Morrison
2013-06-12Matlab: move multifasta2otu into the main quikr folderCalvin Morrison
2013-06-11Merge branch 'master' of github.com:EESI/quikrCalvin
2013-06-11Merge branch 'master' of github.com:mutantturkey/quikrCalvin
2013-06-11finally push this patch to fix the lack of an endCalvin
2013-06-11make documentation more consistentCalvin Morrison
2013-06-11updated changelogCalvin Morrison
2013-06-11remove fileCalvin Morrison
2013-06-11Merge branch 'master' of github.com:mutantturkey/quikrCalvin
2013-06-11cli.markdown modifications for github formattingCalvin Morrison
2013-06-11cli.markdown modificationsCalvin Morrison
2013-06-11remove extra wordCalvin
2013-06-11updated functions with longCalvin
2013-06-11Merge branch 'master' of github.com:EESI/quikrCalvin
2013-06-11use int64_t for NNLS to avoid overflow issuesCalvin
2013-06-11small edits to man pageCalvin
2013-06-11use longs instead of ints, fix a mistake in the --helpCalvin
2013-06-10finish gzip decoding, YOU MUST retrain your apiCalvin
2013-06-10native zlib decoding for quikr/multifasta, was done earlier but never commite...Calvin
2013-06-10remove unused variableCalvin
2013-06-07quikrCustomTranied was not using the specified kmer. Use the correct kmer and...Calvin Morrison
2013-06-07free getline's callsCalvin Morrison
2013-06-07updated help text and manpagesCalvin
2013-06-06updated ChangelogCalvin
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