diff options
Diffstat (limited to 'src/c/quikr_train.c')
| -rw-r--r-- | src/c/quikr_train.c | 9 |
1 files changed, 7 insertions, 2 deletions
diff --git a/src/c/quikr_train.c b/src/c/quikr_train.c index b169fcc..b5b111f 100644 --- a/src/c/quikr_train.c +++ b/src/c/quikr_train.c @@ -10,7 +10,7 @@ #include "quikr_functions.h" -#define USAGE "Usage:\n\tquikr_train [OPTION...] - train a database for use with quikr.\n\nOptions:\n\n-i, --input\n\tthe database of sequences to create the sensing matrix (fasta format)\n\n-k, --kmer\n\tspecify what size of kmer to use. (default value is 6)\n\n-o, --output\n\tthe sensing matrix. (a gzip'd text file)\n\n-v, --verbose\n\tverbose mode." +#define USAGE "Usage:\n\tquikr_train [OPTION...] - train a database for use with quikr.\n\nOptions:\n\n-i, --input\n\tthe database of sequences to create the sensing matrix (fasta format)\n\n-k, --kmer\n\tspecify what size of kmer to use. (default value is 6)\n\n-o, --output\n\tthe sensing matrix. (a gzip'd text file)\n\n-v, --verbose\n\tverbose mode.\n\n-V, --version\n\tprint version." int main(int argc, char **argv) { @@ -36,6 +36,7 @@ int main(int argc, char **argv) { while (1) { static struct option long_options[] = { {"verbose", no_argument, 0, 'v'}, + {"version", no_argument, 0, 'V'}, {"input", required_argument, 0, 'i'}, {"kmer", required_argument, 0, 'k'}, {"output", required_argument, 0, 'o'}, @@ -44,7 +45,7 @@ int main(int argc, char **argv) { int option_index = 0; - c = getopt_long (argc, argv, "i:o:k:hv", long_options, &option_index); + c = getopt_long (argc, argv, "i:o:k:hvV", long_options, &option_index); if (c == -1) break; @@ -62,6 +63,10 @@ int main(int argc, char **argv) { case 'v': verbose = 1; break; + case 'V': + printf("%s\n", VERSION); + exit(EXIT_SUCCESS); + break; case 'h': printf("%s\n", USAGE); exit(EXIT_SUCCESS); |