diff options
| author | Calvin <calvin@EESI> | 2013-05-14 21:51:40 -0400 |
|---|---|---|
| committer | Calvin <calvin@EESI> | 2013-05-14 21:51:40 -0400 |
| commit | 0773aaf89678b967588a902df1f5e6f9ccea393d (patch) | |
| tree | 40762e5df1da876d460d8695357ab0835645e8c6 /src/python | |
| parent | 1d2becc9af591d37badfe0e77751bbb80932472f (diff) | |
release1.0
Diffstat (limited to 'src/python')
| -rwxr-xr-x | src/python/quikr | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/src/python/quikr b/src/python/quikr index 7c9ce25..c7ba4cf 100755 --- a/src/python/quikr +++ b/src/python/quikr @@ -11,7 +11,7 @@ def main(): "Quikr returns the estimated frequencies of batcteria present when given a \ input FASTA file. \n") parser.add_argument("-f", "--fasta", help="the sample's fasta file of NGS READS", required=True) - parser.add_argument("-o", "--output", help="OTU_FRACTION_PRESENT, a vector \ + parser.add_argument("-o", "--output", help="OTU_FRACTION_PRESENT, a vector \ representing the percentage of database sequence's presence in a sequence. (csv output)", required=True) parser.add_argument("-s", "--sensing-matrix", help="the sensing matrix", required=True) parser.add_argument("-l", "--lamb", type=int, help="the lambda size. (default is 10,000") |