release1.0

1 files changed, 14 insertions, 0 deletions

diff --git a/src/c/quikr_functions.h b/src/c/quikr_functions.h
new file mode 100644
index 0000000..1826427
--- /dev/null
+++ b/src/c/quikr_functions.h
@@ -0,0 +1,14 @@
+// count the sequences in a fasta file
+int count_sequences(char *filename);
+
+// normalize a matrix by dividing each element by the sum of it's column
+void normalize_matrix(double *matrix, int height, int width);
+
+// load a sensing matrix
+double *load_sensing_matrix(char *filename, int height, int width);
+
+// load a count matrix
+double *load_count_matrix(char *filename, int width, int kmer);
+
+// load headers
+char **load_headers(char *filename, int sequences);